MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0846c · 45 genes shown · anchor lpqS · open gene page → · ← back to 1 hop

Evidence: Min score 0
mmcO (requalified) — multicopper oxidase MmcO mmcO hemZ (requalified) — ferrochelatase hemZ bfrA (requalified) — bacterioferritin BfrA bfrA Rv0849 (requalified) — MFS transporter Rv0849 bfrB (requalified) — ferritin BfrB bfrB cysK2 (requalified) — cysteine synthase CysK cysK2 lpqS (requalified) — lipoprotein LpqS lpqS Rv2963 (requalified) — permease Rv2963 Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c Rv2267c (requalified) — sulfotransferase Rv2267c Rv0526 (requalified) — thioredoxin Rv0526 Rv1691 (family_assigned) — hypothetical protein Rv1691 hemY (requalified) — protoporphyrinogen oxidase hemY hemQ (requalified) — hydrogen peroxide-dependent heme synthase hemQ hemE (requalified) — uroporphyrinogen decarboxylase hemE Rv0958 (family_assigned) — ATP-binding protein Rv0958 Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1877 (family_assigned) — MDR family MFS transporter Rv1877 Rv1879 (family_assigned) — amidohydrolase family protein Rv1879 Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c ahpC (requalified) — peroxiredoxin AhpC ahpC lpqL (family_assigned) — M28 family metallopeptidase lpqL Rv1770 (family_assigned) — hypothetical protein Rv1770 Rv3684 (requalified) — lyase Rv3684 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 serC (requalified) — phosphoserine transaminase serC Rv0190 (family_assigned) — metal-sensitive transcriptional regulator Rv0190 purU (requalified) — formyltetrahydrofolate deformylase purU Rv0090 (dark) — DUF2127 domain-containing protein Rv0090 Rv3530c (family_assigned) — SDR family oxidoreductase Rv3530c Rv3531c (family_assigned) — hypothetical protein Rv3531c htpG (requalified) — molecular chaperone HtpG htpG alaS (requalified) — alanine--tRNA ligase alaS rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA mftF (requalified) — mycofactocin biosynthesis glycosyltransferase MftF mftF cyp128 (requalified) — cytochrome P450 cyp128 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525 ccdA (requalified) — cytochrome C-type biogenesis protein CcdA ccdA ccsA (requalified) — c-type cytochrome biogenesis protein CcsB ccsA Rv0528 (requalified) — cytochrome c biogenesis protein ResB Rv0528 hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL Rv1692 (family_assigned) — HAD-IIA family hydrolase Rv1692 ppnK (requalified) — NAD kinase ppnK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.