MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0845 · 46 genes shown · anchor narL · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0845 (requalified) — sensor histidine kinase NarS Rv0845 narL (requalified) — two-component system response regulator NarL narL devR (requalified) — two-component system response regulator DevR devR Rv0195 (requalified) — response regulator transcription factor Rv0195 Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv0890c (family_assigned) — HTH-type transcriptional regulator Rv0890c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv0386 (family_assigned) — LuxR family transcriptional regulator Rv0386 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 hsr1 (requalified) — hypothetical protein hsr1 Rv2862c (family_assigned) — DUF1707 domain-containing protein Rv2862c devS (requalified) — two-component system sensor histidine kinase DevS devS sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR dosT (requalified) — two-component system sensor histidine kinase DosT dosT Rv3208 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3208 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv3134c (requalified) — universal stress protein Rv3134c Rv2005c (requalified) — universal stress protein Rv2005c Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 Rv0193c (family_assigned) — hypothetical protein Rv0193c Rv3033 (requalified) — DUF4333 domain-containing protein Rv3033 Rv2114 (dark) — hypothetical protein Rv2114 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 pks12 (requalified) — type I polyketide synthase pks12 rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 Rv0891c (family_assigned) — hypothetical protein Rv0891c embR (requalified) — response regulator transcription factor EmbR embR Rv1359 (family_assigned) — transcriptional regulator Rv1359 citA (requalified) — citrate synthase 2 citA Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c moeY (family_assigned) — Rv1355c family protein moeY Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c Rv1356c (requalified) — hypothetical protein Rv1356c Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr kdpE (requalified) — two-component system response regulator KdpE kdpE Rv1931c (family_assigned) — transcriptional regulator Rv1931c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv2434c (requalified) — mechanosensitive ion channel Rv2434c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.