MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0840c · 35 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
pip (family_assigned) — proline-specific peptidase family protein pip proC (requalified) — pyrroline-5-carboxylate reductase proC Rv1188 (requalified) — proline dehydrogenase Rv1188 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks1 (requalified) — polyketide synthase pks1 Rv0841 (requalified) — transmembrane protein Rv0841 pks7 (requalified) — type I polyketide synthase pks7 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 pks17 (requalified) — polyketide synthase pks17 rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA Rv0499 (family_assigned) — thioesterase family protein Rv0499 proB (requalified) — glutamate 5-kinase proB Rv0498 (requalified) — sugar phosphate isomerase/epimerase Rv0498 Rv1186c (family_assigned) — PucR family transcriptional regulator Rv1186c aldC (requalified) — aldehyde dehydrogenase AldC aldC Rv1249c (family_assigned) — hypothetical protein Rv1249c fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB papA1 (requalified) — acyltransferase PapA1 papA1 pks15 (requalified) — polyketide synthase pks15 mbtC (requalified) — polyketide synthetase MbtC mbtC Rv0842 (requalified) — MFS transporter Rv0842 Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843 pks8 (requalified) — polyketide synthase pks8 pks9 (requalified) — type I polyketide synthase pks9 pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 papA3 (requalified) — acyltransferase PapA3 papA3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.