MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0838 · 46 genes shown · anchor lpqI · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqR (family_assigned) — M15 family metallopeptidase lpqR Rv0839 (family_assigned) — methyltransferase domain-containing protein Rv0839 lpqI (requalified) — lipoprotein LpqI lpqI Rv0315 (requalified) — family 16 glycosylhydrolase Rv0315 ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA mutB (requalified) — methylmalonyl-CoA mutase mutB Rv0175 (family_assigned) — hypothetical protein Rv0175 lprE (family_assigned) — LppP/LprE family lipoprotein lprE Rv3491 (family_assigned) — hypothetical protein Rv3491 Rv0852 (requalified) — fatty-acid--CoA ligase Rv0852 gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB Rv1405c (requalified) — virulence-associated methyltransferase Rv1405c Rv0236A (dark) — hypothetical protein Rv0236A Rv0238 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0238 aftD (family_assigned) — DUF3367 domain-containing protein aftD vapB24 (requalified) — antitoxin vapB24 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv0316 (family_assigned) — muconolactone Delta-isomerase family protein Rv0316 Rv0314c (family_assigned) — membrane protein Rv0314c pirG (requalified) — exported repetitive protein pirG Rv3707c (requalified) — hypothetical protein Rv3707c Rv1987 (family_assigned) — cellulose-binding protein Rv1987 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC alr (requalified) — alanine racemase alr murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD ftsW (family_assigned) — putative lipid II flippase FtsW ftsW mutA (family_assigned) — methylmalonyl-CoA mutase small subunit mutA meaB (requalified) — methylmalonyl Co-A mutase-associated GTPase MeaB meaB Rv1322A (family_assigned) — hypothetical protein Rv1322A sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD Rv1489A (family_assigned) — hypothetical protein Rv1489A Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv0176 (family_assigned) — RDD family protein Rv0176 Rv0177 (requalified) — Mce associated protein Rv0177 mce1F (family_assigned) — MCE family protein mce1F mce1C (family_assigned) — MCE family protein mce1C mce1B (family_assigned) — virulence factor Mce family protein mce1B dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c polA (requalified) — DNA polymerase I polA deaD (requalified) — DEAD/DEAH box helicase deaD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.