MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0833 · 45 genes shown · anchor PE_PGRS12 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS13 (family_assigned) — PE-PGRS family protein PE_PGRS13 PE_PGRS13 PE_PGRS12 (family_assigned) — PE-PGRS family protein PE_PGRS12 PE_PGRS12 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 PE9 (family_assigned) — PE family protein PE9 PE9 Rv3412 (dark) — DUF5319 domain-containing protein Rv3412 arfC (family_assigned) — hypothetical protein arfC vapC2 (family_assigned) — PIN domain nuclease vapC2 PE_PGRS60 (family_assigned) — PE-PGRS family-related protein PE_PGRS60 PE_PGRS60 PE10 (family_assigned) — PE family protein PE10 PE10 PE_PGRS37 (family_assigned) — PE-PGRS family protein PE_PGRS37 PE_PGRS37 PPE65 (family_assigned) — PPE family protein PPE65 PPE65 rpmJ (requalified) — 50S ribosomal protein L36 rpmJ Rv2133c (family_assigned) — SCO1664 family protein Rv2133c alaS (requalified) — alanine--tRNA ligase alaS helZ (requalified) — DEAD/DEAH box helicase helZ Rv2267c (requalified) — sulfotransferase Rv2267c Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 Rv1087A (family_assigned) — Conserved hypothetical protein Rv1087A panC (requalified) — pantoate--beta-alanine ligase panC Rv0992c (requalified) — 5-formyltetrahydrofolate cyclo-ligase Rv0992c Rv2205c (requalified) — glycerate kinase Rv2205c ripC (requalified) — peptidoglycan hydrolase RipC ripC guaB2 (requalified) — IMP dehydrogenase guaB2 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c Rv3231c (family_assigned) — hypothetical protein Rv3231c 35kd_ag (family_assigned) — hypothetical protein 35kd_ag arfA (family_assigned) — peptidoglycan-binding protein ArfA arfA arfB (family_assigned) — hypothetical protein arfB espK (family_assigned) — ESX-1 secretion-associated protein EspK espK PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 Rv0898c (family_assigned) — DUF2630 family protein Rv0898c PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.