MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0782 · 46 genes shown · anchor ptrBa · open gene page → · ← back to 1 hop

Evidence: Min score 0
ptrBb (family_assigned) — Probable protease II PtrBb [second part] (oligopep ptrBb ptrBa (family_assigned) — Probable protease II PtrBa [first part] (oligopept ptrBa purC (requalified) — phosphoribosylaminoimidazolesuccinocarboxamide syn purC clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 Rv0779c (dark) — hypothetical protein Rv0779c Rv1732c (family_assigned) — thioredoxin family protein Rv1732c clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv0457c (family_assigned) — prolyl oligopeptidase family protein Rv0457c Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 canB (requalified) — beta-carbonic anhydrase CanB canB Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 canA (requalified) — beta-carbonic anhydrase CanA canA purD (requalified) — phosphoribosylamine--glycine ligase purD purB (requalified) — adenylosuccinate lyase purB purE (requalified) — 5-(carboxyamino)imidazole ribonucleotide mutase purE purN (requalified) — phosphoribosylglycinamide formyltransferase purN purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL clpX (family_assigned) — ATP-dependent Clp protease ATP-binding subunit Clp clpX tig (requalified) — trigger factor tig clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 clpB (requalified) — chaperone protein ClpB clpB groES (requalified) — chaperonin GroES groES Rv0517 (requalified) — acyltransferase Rv0517 Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c pgk (requalified) — phosphoglycerate kinase pgk Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0459 (family_assigned) — DUF779 domain-containing protein Rv0459 Rv0460 (family_assigned) — hypothetical protein Rv0460 echA2 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA2 Rv0461 (requalified) — transmembrane protein Rv0461 recR (requalified) — recombination mediator RecR recR Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv3714c (family_assigned) — hypothetical protein Rv3714c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX rimP (requalified) — ribosome maturation factor RimP rimP omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 Rv3273 (requalified) — transmembrane carbonic anhydrase Rv3273

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.