MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0781 · 41 genes shown · anchor ptrBb · open gene page → · ← back to 1 hop

Evidence: Min score 0
ptrBa (family_assigned) — Probable protease II PtrBa [first part] (oligopept ptrBa ptrBb (family_assigned) — Probable protease II PtrBb [second part] (oligopep ptrBb purC (requalified) — phosphoribosylaminoimidazolesuccinocarboxamide syn purC Rv0457c (family_assigned) — prolyl oligopeptidase family protein Rv0457c clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 Rv0779c (dark) — hypothetical protein Rv0779c Rv1732c (family_assigned) — thioredoxin family protein Rv1732c clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 purD (requalified) — phosphoribosylamine--glycine ligase purD purB (requalified) — adenylosuccinate lyase purB purE (requalified) — 5-(carboxyamino)imidazole ribonucleotide mutase purE purN (requalified) — phosphoribosylglycinamide formyltransferase purN purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0459 (family_assigned) — DUF779 domain-containing protein Rv0459 Rv0460 (family_assigned) — hypothetical protein Rv0460 echA2 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA2 Rv0461 (requalified) — transmembrane protein Rv0461 clpX (family_assigned) — ATP-dependent Clp protease ATP-binding subunit Clp clpX tig (requalified) — trigger factor tig clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 clpB (requalified) — chaperone protein ClpB clpB groES (requalified) — chaperonin GroES groES Rv0517 (requalified) — acyltransferase Rv0517 Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c pgk (requalified) — phosphoglycerate kinase pgk Rv1733c (family_assigned) — hypothetical protein Rv1733c recR (requalified) — recombination mediator RecR recR Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv3714c (family_assigned) — hypothetical protein Rv3714c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX rimP (requalified) — ribosome maturation factor RimP rimP Rv3194c (family_assigned) — PDZ domain-containing protein Rv3194c Rv3196 (family_assigned) — hypothetical protein Rv3196 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.