MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0757 · 38 genes shown · anchor phoR · open gene page → · ← back to 1 hop

Evidence: Min score 0
phoP (requalified) — two-component system response regulator PhoP phoP phoR (requalified) — sensory box histidine kinase PhoR phoR Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c prrB (requalified) — two-component system sensor histidine kinase PrrB prrB trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS tcrY (requalified) — two component sensor kinase TcrY tcrY senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 mprB (requalified) — two-component system sensor histidine kinase MprB mprB Rv0756c (family_assigned) — hypothetical protein Rv0756c mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c Rv2998A (family_assigned) — Conserved hypothetical protein Rv2998A hrcA (requalified) — heat-inducible transcriptional repressor HrcA hrcA tcrX (requalified) — two-component system response regulator TcrX tcrX mtrA (requalified) — two-component system response regulator MtrA mtrA trcR (requalified) — two-component system response regulator TrcR trcR prrA (requalified) — two-component system response regulator PrrA prrA tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA regX3 (requalified) — two component sensory transduction protein RegX regX3 mprA (requalified) — two-component system response regulator MprA mprA kdpE (requalified) — two-component system response regulator KdpE kdpE pepD (requalified) — serine protease PepD pepD Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3906c (requalified) — pullulanase Rv3906c ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB Rv1734c (family_assigned) — hypothetical protein Rv1734c dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 grpE (requalified) — nucleotide exchange factor GrpE grpE Rv2372c (requalified) — 16S rRNA (uracil(1498)-N(3))-methyltransferase Rv2372c Rv2375 (family_assigned) — type II toxin-antitoxin system VapB family antitox Rv2375 dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.