MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0754 · 45 genes shown · anchor PPE8 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS11 (family_assigned) — PE-PGRS family protein PE_PGRS11 PE_PGRS11 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 Rv1004c (family_assigned) — hypothetical protein Rv1004c Rv0613c (family_assigned) — SEC-C domain-containing protein Rv0613c PPE5 (family_assigned) — PPE family protein PPE5 PPE5 iniB (requalified) — isoniazid-induced protein IniB iniB PPE34 (family_assigned) — PPE family protein PPE34 PPE34 Rv2209 (requalified) — MFS transporter Rv2209 fadE9 (family_assigned) — acyl-CoA dehydrogenase family protein fadE9 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2086 (family_assigned) — hypothetical protein Rv2086 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv2083 (dark) — hypothetical protein Rv2083 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2084 (dark) — hypothetical protein Rv2084 espE (requalified) — type VII secretion system ESX-1 associated protein espE csm4 (requalified) — type III-A CRISPR-associated RAMP protein Csm4 csm4 csm3 (requalified) — type III-A CRISPR-associated RAMP protein Csm3 csm3 csm2 (requalified) — type III-A CRISPR-associated protein Csm2 csm2 cas10 (requalified) — type III-A CRISPR-associated protein Cas10/Csm1 cas10 Rv2824c (requalified) — CRISPR-associated endoribonuclease Cas6 Rv2824c Rv2818c (requalified) — CRISPR-associated protein Csm6 Rv2818c rplD (requalified) — 50S ribosomal protein L4 rplD ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY rpsB (requalified) — 30S ribosomal protein S2 rpsB rplJ (requalified) — 50S ribosomal protein L10 rplJ rplX (requalified) — 50S ribosomal protein L24 rplX rplW (requalified) — 50S ribosomal protein L23 rplW PPE21 (family_assigned) — PPE family protein PPE21 PPE21 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE35 (family_assigned) — PPE family protein PPE35 PPE35 PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 mmsB (requalified) — 3-hydroxyisobutyrate dehydrogenase mmsB mmsA (requalified) — CoA-acylating methylmalonate-semialdehyde dehydrog mmsA fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.