MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0748 · 45 genes shown · anchor vapC31 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 PE_PGRS10 (family_assigned) — PE-PGRS family protein PE_PGRS10 PE_PGRS10 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapC33 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC33 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 vapC43 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC43 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC41 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC41 vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 Rv0278c (family_assigned) — PE-PGRS family protein PE_PGRS3 Rv0278c zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 pknD (requalified) — serine/threonine protein kinase PknD pknD lppD (requalified) — lipoprotein LppD lppD Rv0311 (family_assigned) — hypothetical protein Rv0311 vapB48 (requalified) — antitoxin VapB48 vapB48 glpK (requalified) — glycerol kinase GlpK glpK Rv3698 (family_assigned) — hypothetical protein Rv3698 vapB33 (requalified) — type II toxin-antitoxin system antitoxin VapB33 vapB33 mdh (requalified) — malate dehydrogenase mdh vapB37 (requalified) — antitoxin vapB37 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr rip (requalified) — zinc metalloprotease Rip rip vapB47 (requalified) — antitoxin VapB47 vapB47 vapB46 (requalified) — antitoxin VapB46 vapB46 Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapB41 (requalified) — antitoxin VapB41 vapB41 Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE vapC22 (family_assigned) — PIN domain-containing protein vapC22 vapB38 (requalified) — antitoxin vapB38 Rv2492 (requalified) — hypothetical protein Rv2492 Rv2491 (family_assigned) — TIGR00725 family protein Rv2491 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 vapC32 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC32

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.