MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0735 · 46 genes shown · anchor rslA · open gene page → · ← back to 1 hop

Evidence: Min score 0
sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL rslA (requalified) — anti-sigma-L factor RslA rslA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ mapA (requalified) — methionine aminopeptidase mapA Rv1137c (dark) — Hypothetical protein Rv1137c adk (requalified) — adenylate kinase adk secY (family_assigned) — preprotein translocase subunit SecY secY Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c sigC (requalified) — RNA polymerase sigma factor SigC sigC sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv0737 (family_assigned) — MarR family transcriptional regulator Rv0737 Rv1138c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1138c pks10 (requalified) — type III polyketide synthase pks10 Rv1146 (requalified) — transmembrane transport protein Rv1146 sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ rplR (requalified) — 50S ribosomal protein L18 rplR rplC (requalified) — 50S ribosomal protein L3 rplC rplF (requalified) — 50S ribosomal protein L6 rplF rplE (requalified) — 50S ribosomal protein L5 rplE Rv1139c (family_assigned) — isoprenylcysteine carboxyl methyltransferase famil Rv1139c rpsK (requalified) — 30S ribosomal protein S11 rpsK atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH purB (requalified) — adenylosuccinate lyase purB apt (requalified) — adenine phosphoribosyltransferase apt secE1 (requalified) — preprotein translocase SecE secE1 rpsC (requalified) — 30S ribosomal protein S3 rpsC rplV (requalified) — 50S ribosomal protein L22 rplV cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr embR (requalified) — response regulator transcription factor EmbR embR kdpE (requalified) — two-component system response regulator KdpE kdpE Rv1931c (family_assigned) — transcriptional regulator Rv1931c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv0093c (family_assigned) — membrane protein Rv0093c sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH blaC (requalified) — beta-lactamase blaC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.