MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0729 · 46 genes shown · anchor fucA · open gene page → · ← back to 1 hop

Evidence: Min score 0
xylB (requalified) — FGGY-family carbohydrate kinase xylB rpe (requalified) — ribulose-phosphate 3-epimerase rpe fucA (requalified) — L-fuculose-phosphate aldolase fucA serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 Rv2298 (requalified) — aldo/keto reductase Rv2298 hsr1 (requalified) — hypothetical protein hsr1 rbsK (requalified) — ribokinase RbsK rbsK bglS (requalified) — beta-glucosidase BglS bglS tal (requalified) — transaldolase tal tkt (requalified) — transketolase tkt gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 rpiB (requalified) — ribose-5-phosphate isomerase B rpiB gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu tpi (requalified) — triose-phosphate isomerase tpi fba (requalified) — class II fructose-bisphosphate aldolase fba citE (family_assigned) — citrate (pro-3S)-lyase subunit beta citE Rv3075c (requalified) — CoA ester lyase Rv3075c serC (requalified) — phosphoserine transaminase serC gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH pepE (family_assigned) — Xaa-Pro peptidase family protein pepE gltB (family_assigned) — glutamate synthase large subunit gltB guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv3577 (requalified) — hypothetical protein Rv3577 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv3033 (requalified) — DUF4333 domain-containing protein Rv3033 Rv2114 (dark) — hypothetical protein Rv2114 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 eno (requalified) — phosphopyruvate hydratase eno Rv2971 (requalified) — aldo/keto reductase Rv2971 rlmB (requalified) — 23S rRNA (guanosine(2251)-2'-O)-methyltransferase rlmB tsnR (requalified) — RNA methyltransferase tsnR

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.