MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0687 · 46 genes shown · anchor htdY · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0687 (family_assigned) — Rv0687 family mycofactocin-dependent SDR oxidoredu Rv0687 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY Rv0688 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0688 fas (requalified) — fatty acid synthase fas Rv0686 (family_assigned) — SHOCT domain-containing protein Rv0686 Rv3538 (requalified) — dehydrogenase Rv3538 tuf (requalified) — elongation factor Tu tuf Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 cmrA (requalified) — mycolate reductase cmrA htpG (requalified) — molecular chaperone HtpG htpG Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ Rv3728 (requalified) — MFS transporter Rv3728 Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c nirD (family_assigned) — nitrite reductase small subunit NirD nirD rubB (requalified) — rubredoxin RubB rubB rubA (requalified) — rubredoxin rubA Rv2633c (requalified) — non-heme di-iron catalase Rv2633c pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 fusA1 (requalified) — elongation factor G fusA1 rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsG (requalified) — 30S ribosomal protein S7 rpsG kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD tsf (requalified) — translation elongation factor Ts tsf rpsE (requalified) — 30S ribosomal protein S5 rpsE rplB (requalified) — 50S ribosomal protein L2 rplB rplO (requalified) — 50S ribosomal protein L15 rplO rpsJ (requalified) — 30S ribosomal protein S10 rpsJ fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA gltD (family_assigned) — glutamate synthase subunit beta gltD ephB (requalified) — epoxide hydrolase EphB ephB ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 Rv2508c (requalified) — MFS transporter Rv2508c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.