MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0678 · 46 genes shown · anchor mmpL5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv1404 (family_assigned) — MarR family transcriptional regulator Rv1404 Rv1455 (family_assigned) — hypothetical protein Rv1455 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR Rv1453 (family_assigned) — PucR family transcriptional regulator Rv1453 Rv1049 (requalified) — oxidation-sensing regulator MosR Rv1049 Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 raaS (family_assigned) — transcriptional regulator RaaS raaS Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c mmpL4 (requalified) — transmembrane transport protein MmpL4 mmpL4 mmpL9 (requalified) — RND transporter MmpL9 mmpL9 Rv3161c (family_assigned) — aromatic ring-hydroxylating dioxygenase subunit al Rv3161c Rv0560c (requalified) — benzoquinone methyltransferase Rv0560c Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 mmr (requalified) — multidrug resistance protein Mmr mmr Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c cobB (requalified) — NAD-dependent protein deacylase cobB Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 embR (requalified) — response regulator transcription factor EmbR embR Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c Rv0791c (requalified) — LLM class flavin-dependent oxidoreductase Rv0791c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv3134c (requalified) — universal stress protein Rv3134c acg (family_assigned) — FMN-binding protein Acg acg Rv2627c (family_assigned) — alpha/beta hydrolase Rv2627c hrp1 (requalified) — hypoxic response protein Hrp1 hrp1 Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c narK2 (requalified) — nitrate transporter NarK narK2 Rv1403c (requalified) — class I SAM-dependent methyltransferase Rv1403c Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.