MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0676c · 46 genes shown · anchor mmpS5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 lppX (requalified) — LppX_LprAFG lipoprotein lppX Rv0466 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv0466 Rv0128 (family_assigned) — YoaK family protein Rv0128 Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv0523c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv0523c raaS (family_assigned) — transcriptional regulator RaaS raaS Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c mmpL4 (requalified) — transmembrane transport protein MmpL4 mmpL4 mmpL9 (requalified) — RND transporter MmpL9 mmpL9 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv3161c (family_assigned) — aromatic ring-hydroxylating dioxygenase subunit al Rv3161c Rv0560c (requalified) — benzoquinone methyltransferase Rv0560c Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 mmpL2 (requalified) — RND transporter MmpL2 mmpL2 mmpL1 (requalified) — RND transporter MmpL1 mmpL1 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 pks1 (requalified) — polyketide synthase pks1 mmpL7 (requalified) — phthiocerol dimycocerosate RND transporter MmpL7 mmpL7 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 PPE13 (family_assigned) — PPE family protein PPE13 PPE13 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 PPE10 (family_assigned) — PPE family protein PPE10 PPE10 lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.