MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0671 · 44 genes shown · anchor end · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqP (family_assigned) — PHB depolymerase family esterase lpqP end (requalified) — deoxyribonuclease IV end fadE8 (family_assigned) — acyl-CoA dehydrogenase family protein fadE8 echA4 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA4 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 echA5 (requalified) — enoyl-CoA hydratase EchA5 echA5 Rv0669c (requalified) — neutral ceramidase Rv0669c Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv0519c (family_assigned) — membrane protein Rv0519c Rv1498c (requalified) — methyltransferase Rv1498c speE (requalified) — spermidine synthase speE xthA (requalified) — exodeoxyribonuclease III protein XthA xthA fadB (requalified) — fatty oxidation protein FadB fadB fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c moxR2 (family_assigned) — MoxR family ATPase moxR2 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA zwf2 (requalified) — glucose-6-phosphate dehydrogenase zwf2 zwf1 (requalified) — glucose-6-phosphate 1-dehydrogenase zwf1 dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaE2 (requalified) — error-prone DNA polymerase dnaE2 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2306A (family_assigned) — Possible conserved membrane protein Rv2306A PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 iniB (requalified) — isoniazid-induced protein IniB iniB Rv2306B (family_assigned) — Possible conserved membrane protein Rv2306B mbtB (requalified) — phenyloxazoline synthase MbtB mbtB Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 pks13 (requalified) — polyketide synthase Pks13 pks13 Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH Rv1498A (family_assigned) — hypothetical protein Rv1498A Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 Rv1500 (family_assigned) — glycosyltransferase family 2 protein Rv1500 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv2600 (family_assigned) — integral membrane protein Rv2600 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv2597 (dark) — DUF4178 domain-containing protein Rv2597

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.