MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0669c · 46 genes shown · anchor end · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0669c (requalified) — neutral ceramidase Rv0669c nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA end (requalified) — deoxyribonuclease IV end zwf2 (requalified) — glucose-6-phosphate dehydrogenase zwf2 zwf1 (requalified) — glucose-6-phosphate 1-dehydrogenase zwf1 dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaE2 (requalified) — error-prone DNA polymerase dnaE2 lpqP (family_assigned) — PHB depolymerase family esterase lpqP pncA (requalified) — pyrazinamidase PncA pncA lipZ (family_assigned) — alpha/beta hydrolase lipZ pgmA (requalified) — phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosp pgmA purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH ilvD (requalified) — dihydroxy-acid dehydratase ilvD sugI (requalified) — sugar-transport integral membrane protein SugI sugI glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS mrsA (requalified) — phosphoglucosamine mutase mrsA devB (requalified) — 6-phosphogluconolactonase devB Rv3242c (family_assigned) — ComF family protein Rv3242c xthA (requalified) — exodeoxyribonuclease III protein XthA xthA fadE8 (family_assigned) — acyl-CoA dehydrogenase family protein fadE8 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 echA4 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA4 echA5 (requalified) — enoyl-CoA hydratase EchA5 echA5 tal (requalified) — transaldolase tal pgi (requalified) — glucose-6-phosphate isomerase pgi tkt (requalified) — transketolase tkt gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 opcA (requalified) — glucose-6-phosphate dehydrogenase assembly protein opcA gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c Rv3395c (family_assigned) — hypothetical protein Rv3395c ssb (family_assigned) — single-stranded DNA-binding protein ssb Rv2478c (family_assigned) — hypothetical protein Rv2478c pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 cobB (requalified) — NAD-dependent protein deacylase cobB iunH (requalified) — nucleoside hydrolase IunH iunH deoD (requalified) — purine-nucleoside phosphorylase deoD Rv2042c (family_assigned) — ketosteroid isomerase family protein Rv2042c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.