MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0668 · 42 genes shown · anchor rpoA · open gene page → · ← back to 1 hop

Evidence: Min score 0
rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 sigA (requalified) — RNA polymerase sigma factor sigA sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH rpsE (requalified) — 30S ribosomal protein S5 rpsE rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsS (requalified) — 30S ribosomal protein S19 rpsS nusA (requalified) — transcription termination factor NusA nusA rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 rslA (requalified) — anti-sigma-L factor RslA rslA mapA (requalified) — methionine aminopeptidase mapA ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR rshA (requalified) — anti-sigma factor RshA rshA Rv3222c (family_assigned) — hypothetical protein Rv3222c rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsP (requalified) — 30S ribosomal protein S16 rpsP rplC (requalified) — 50S ribosomal protein L3 rplC rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rplO (requalified) — 50S ribosomal protein L15 rplO rplV (requalified) — 50S ribosomal protein L22 rplV rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpmF (requalified) — 50S ribosomal protein L32 rpmF rpsI (requalified) — 30S ribosomal protein S9 rpsI rplS (requalified) — 50S ribosomal protein L19 rplS rplB (requalified) — 50S ribosomal protein L2 rplB rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplP (requalified) — 50S ribosomal protein L16 rplP rpsF (requalified) — 30S ribosomal protein S6 rpsF rimP (requalified) — ribosome maturation factor RimP rimP rplK (requalified) — 50S ribosomal protein L11 rplK rpsG (requalified) — 30S ribosomal protein S7 rpsG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.