MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0665 · 44 genes shown · anchor vapB5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapB8 (requalified) — antitoxin VapB8 vapB8 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 Rv0666 (dark) — hypothetical protein Rv0666 atsD (requalified) — arylsulfatase AtsD atsD vapB47 (requalified) — antitoxin VapB47 vapB47 Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 Rv3479 (requalified) — transmembrane protein Rv3479 vapB46 (requalified) — antitoxin VapB46 vapB46 Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapB7 (requalified) — antitoxin vapB7 vapC7 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC7 secG (family_assigned) — preprotein translocase subunit SecG secG vapC14 (requalified) — ribonuclease VapC14 vapC14 Rv0597c (family_assigned) — ATP-binding protein Rv0597c vapC27 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC27 Rv0712 (family_assigned) — formylglycine-generating enzyme family protein Rv0712 glgC (requalified) — glucose-1-phosphate adenylyltransferase glgC vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 mazE2 (family_assigned) — ribbon-helix-helix protein%2C CopG family mazE2 relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB relF (requalified) — type II toxin-antitoxin system antitoxin RelF relF mazE6 (requalified) — antitoxin MazE6 mazE6 mazE9 (requalified) — antitoxin MazE9 mazE9 Rv1947 (family_assigned) — hypothetical protein Rv1947 Rv0470A (family_assigned) — hypothetical protein Rv0470A Rv1639c (family_assigned) — alpha/beta hydrolase family protein Rv1639c Rv3386 (requalified) — transposase Rv3386 Rv3098A (family_assigned) — PemK-like protein Rv3098A Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.