MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0662c · 46 genes shown · anchor vapC7 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB7 (requalified) — antitoxin vapB7 vapC7 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC7 mazE2 (family_assigned) — ribbon-helix-helix protein%2C CopG family mazE2 atsD (requalified) — arylsulfatase AtsD atsD mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 vapB8 (requalified) — antitoxin VapB8 vapB8 vapC8 (family_assigned) — PIN domain-containing protein vapC8 Rv0666 (dark) — hypothetical protein Rv0666 Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv2640c (family_assigned) — Rv2640c family ArsR-like transcriptional regulator Rv2640c relF (requalified) — type II toxin-antitoxin system antitoxin RelF relF vapC43 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC43 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv0658c (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0658c mazF6 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF6 mazE3 (requalified) — antitoxin MazE3 mazE3 Rv0712 (family_assigned) — formylglycine-generating enzyme family protein Rv0712 glgC (requalified) — glucose-1-phosphate adenylyltransferase glgC relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB mazE6 (requalified) — antitoxin MazE6 mazE6 mazE9 (requalified) — antitoxin MazE9 mazE9 secG (family_assigned) — preprotein translocase subunit SecG secG vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapB47 (requalified) — antitoxin VapB47 vapB47 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c cadI (requalified) — cadmium-induced metalloenzyme CadI cadI arsC (family_assigned) — ACR3 family arsenite efflux transporter arsC Rv2642 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2642 Rv2639c (family_assigned) — YnfA family protein Rv2639c Rv0576 (family_assigned) — TIGR03086 family metal-binding protein Rv0576 cmtR (family_assigned) — Cd(II)/Pb(II)-sensing metalloregulatory transcript cmtR relG (family_assigned) — type II toxin-antitoxin system RelE/ParE family to relG relK (family_assigned) — Txe/YoeB family addiction module toxin relK mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 Rv2864c (family_assigned) — penicillin-binding protein Rv2864c vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr rip (requalified) — zinc metalloprotease Rip rip

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.