MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0654 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0654 (requalified) — carotenoid cleavage oxygenase Rv0654 Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c mkl (family_assigned) — ABC transporter ATP-binding protein mkl bacA (family_assigned) — vitamin B12 ABC transporter ATP-binding protein Ba bacA gmk (requalified) — guanylate kinase gmk Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c pepB (requalified) — leucyl aminopeptidase pepB lpqL (family_assigned) — M28 family metallopeptidase lpqL Rv1770 (family_assigned) — hypothetical protein Rv1770 Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv2390c (family_assigned) — hypothetical protein Rv2390c Rv1362c (family_assigned) — hypothetical protein Rv1362c Rv1972 (requalified) — Mce associated membrane protein Rv1972 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1931c (family_assigned) — transcriptional regulator Rv1931c yrbE1A (family_assigned) — ABC transporter permease yrbE1A yrbE1B (family_assigned) — ABC transporter permease yrbE1B yrbE3A (family_assigned) — ABC transporter permease yrbE3A Rv0588 (family_assigned) — ABC transporter permease Rv0588 yrbE4B (family_assigned) — ABC transporter permease yrbE4B yrbE3B (family_assigned) — ABC transporter permease yrbE3B ilvG (requalified) — acetolactate synthase ilvG Rv0435c (family_assigned) — AAA family ATPase Rv0435c pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 Rv1823 (family_assigned) — DUF881 domain-containing protein Rv1823 Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA apt (requalified) — adenine phosphoribosyltransferase apt pykA (requalified) — pyruvate kinase pykA ndkA (requalified) — nucleoside-diphosphate kinase ndkA hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt fadB (requalified) — fatty oxidation protein FadB fadB Rv0913c (family_assigned) — carotenoid oxygenase family protein Rv0913c fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 acs (requalified) — acetate--CoA ligase acs ltp3 (family_assigned) — thiolase domain-containing protein ltp3 pepN (requalified) — aminopeptidase PepN pepN ggtA (requalified) — bifunctional cephalosporin acylase/gamma-glutamylt ggtA ggtB (family_assigned) — gamma-glutamyltransferase family protein ggtB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.