MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0639 · 46 genes shown · anchor rplK · open gene page → · ← back to 1 hop

Evidence: Min score 0
nusG (requalified) — transcription termination/antitermination protein nusG rplK (requalified) — 50S ribosomal protein L11 rplK secE1 (requalified) — preprotein translocase SecE secE1 rplA (requalified) — 50S ribosomal protein L1 rplA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpsC (requalified) — 30S ribosomal protein S3 rpsC rplF (requalified) — 50S ribosomal protein L6 rplF rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rplL (requalified) — 50S ribosomal protein L7/L12 rplL nusA (requalified) — transcription termination factor NusA nusA rplR (requalified) — 50S ribosomal protein L18 rplR rplJ (requalified) — 50S ribosomal protein L10 rplJ rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0500B (family_assigned) — Conserved hypothetical protein Rv0500B secG (family_assigned) — preprotein translocase subunit SecG secG secY (family_assigned) — preprotein translocase subunit SecY secY secA1 (family_assigned) — protein translocase subunit SecA secA1 rplO (requalified) — 50S ribosomal protein L15 rplO rplP (requalified) — 50S ribosomal protein L16 rplP rplV (requalified) — 50S ribosomal protein L22 rplV rpmC (requalified) — 50S ribosomal protein L29 rpmC sigA (requalified) — RNA polymerase sigma factor sigA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rpmA (requalified) — 50S ribosomal protein L27 rpmA rplM (requalified) — 50S ribosomal protein L13 rplM rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB rplQ (requalified) — 50S ribosomal protein L17 rplQ rplD (requalified) — 50S ribosomal protein L4 rplD rplI (requalified) — 50S ribosomal protein L9 rplI rpmD (requalified) — 50S ribosomal protein L30 rpmD rpsP (requalified) — 30S ribosomal protein S16 rpsP rplC (requalified) — 50S ribosomal protein L3 rplC rpmI (requalified) — 50S ribosomal protein L35 rpmI

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.