MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0634c · 45 genes shown · anchor echA3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0634c (requalified) — MBL fold metallo-hydrolase Rv0634c echA3 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA3 Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 Rv0634A (family_assigned) — hypothetical protein Rv0634A Rv0633c (family_assigned) — hypothetical protein Rv0633c Rv2367c (requalified) — endoribonuclease Rv2367c rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH truA (requalified) — tRNA pseudouridine synthase A truA Rv0390 (family_assigned) — rhodanese-like domain-containing protein Rv0390 Rv1066 (family_assigned) — rhodanese-like domain-containing protein Rv1066 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 sirA (requalified) — sulfite reductase sirA metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB Rv3684 (requalified) — lyase Rv3684 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 aao (requalified) — FAD-dependent oxidoreductase aao hadC (family_assigned) — (3R)-hydroxyacyl-ACP dehydratase subunit HadC hadC hadB (family_assigned) — (3R)-hydroxyacyl-ACP dehydratase subunit HadB hadB rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 Rv0760c (family_assigned) — ketosteroid isomerase family protein Rv0760c Rv2286c (family_assigned) — DsbA family protein Rv2286c phoH1 (requalified) — phosphate starvation-inducible protein PhoH phoH1 Rv2366c (family_assigned) — hemolysin family protein Rv2366c Rv2365c (requalified) — cytidine deaminase Rv2365c era (requalified) — GTPase Era era sodA (requalified) — superoxide dismutase sodA rplQ (requalified) — 50S ribosomal protein L17 rplQ mraZ (requalified) — division/cell wall cluster transcriptional repress mraZ pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB Rv2164c (family_assigned) — hypothetical protein Rv2164c rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsP (requalified) — 30S ribosomal protein S16 rpsP rpsF (requalified) — 30S ribosomal protein S6 rpsF rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsM (requalified) — 30S ribosomal protein S13 rpsM truB (requalified) — tRNA pseudouridine(55) synthase TruB truB purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.