MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0630c · 46 genes shown · anchor recC · open gene page → · ← back to 1 hop

Evidence: Min score 0
recB (family_assigned) — exodeoxyribonuclease V subunit beta recB recC (family_assigned) — exodeoxyribonuclease V subunit gamma recC recD (family_assigned) — exodeoxyribonuclease V subunit alpha recD Rv2311 (family_assigned) — hypothetical protein Rv2311 Rv0628c (family_assigned) — FIST N-terminal domain-containing protein Rv0628c Rv2037c (family_assigned) — patatin-like phospholipase family protein Rv2037c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu echA3 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA3 Rv2529 (family_assigned) — hypothetical protein Rv2529 dnaE2 (requalified) — error-prone DNA polymerase dnaE2 dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 recA (requalified) — intein-containing recombinase RecA recA truB (requalified) — tRNA pseudouridine(55) synthase TruB truB dinG (requalified) — ATP-dependent helicase DinG dinG Rv2312 (dark) — hypothetical protein Rv2312 Rv2041c (family_assigned) — sugar ABC transporter substrate-binding protein Rv2041c Rv2039c (family_assigned) — carbohydrate ABC transporter permease Rv2039c ugpC (family_assigned) — sn-glycerol-3-phosphate ABC transporter ATP-bindin ugpC Rv2040c (family_assigned) — sugar ABC transporter permease Rv2040c pncA (requalified) — pyrazinamidase PncA pncA Rv2042c (family_assigned) — ketosteroid isomerase family protein Rv2042c Rv0954 (requalified) — DUF5336 domain-containing protein Rv0954 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG purN (requalified) — phosphoribosylglycinamide formyltransferase purN purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH pimE (requalified) — mannosyltransferase pimE fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ ligA (requalified) — NAD-dependent DNA ligase LigA ligA fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 topA (requalified) — type I DNA topoisomerase topA polA (requalified) — DNA polymerase I polA lprE (family_assigned) — LppP/LprE family lipoprotein lprE Rv2090 (requalified) — 5'-3' exonuclease Rv2090 rplA (requalified) — 50S ribosomal protein L1 rplA Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.