MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0629c · 46 genes shown · anchor recC · open gene page → · ← back to 1 hop

Evidence: Min score 0
recD (family_assigned) — exodeoxyribonuclease V subunit alpha recD recC (family_assigned) — exodeoxyribonuclease V subunit gamma recC recB (family_assigned) — exodeoxyribonuclease V subunit beta recB truB (requalified) — tRNA pseudouridine(55) synthase TruB truB dinG (requalified) — ATP-dependent helicase DinG dinG Rv0628c (family_assigned) — FIST N-terminal domain-containing protein Rv0628c Rv2037c (family_assigned) — patatin-like phospholipase family protein Rv2037c lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN adnA (requalified) — ATP-dependent DNA helicase AdnA adnA Rv2529 (family_assigned) — hypothetical protein Rv2529 adnB (requalified) — ATP-dependent DNA helicase AdnB adnB echA3 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA3 Rv2311 (family_assigned) — hypothetical protein Rv2311 Rv0955 (family_assigned) — DUF6350 family protein Rv0955 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA infB (requalified) — translation initiation factor IF-2 infB pptT (requalified) — 4'-phosphopantetheinyl transferase pptT Rv2795c (requalified) — metallophosphoesterase Rv2795c rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB mec (requalified) — CysO-cysteine peptidase mec Rv1277 (family_assigned) — hypothetical protein Rv1277 polA (requalified) — DNA polymerase I polA Rv2041c (family_assigned) — sugar ABC transporter substrate-binding protein Rv2041c Rv2039c (family_assigned) — carbohydrate ABC transporter permease Rv2039c ugpC (family_assigned) — sn-glycerol-3-phosphate ABC transporter ATP-bindin ugpC Rv2040c (family_assigned) — sugar ABC transporter permease Rv2040c pncA (requalified) — pyrazinamidase PncA pncA Rv2042c (family_assigned) — ketosteroid isomerase family protein Rv2042c Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA helZ (requalified) — DEAD/DEAH box helicase helZ ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 Rv2191 (family_assigned) — hypothetical protein Rv2191 nudC (requalified) — NAD(+) diphosphatase nudC radA (requalified) — DNA repair protein RadA radA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.