MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0626 · 45 genes shown · anchor vapC5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv3479 (requalified) — transmembrane protein Rv3479 Rv0625c (family_assigned) — TVP38/TMEM64 family protein Rv0625c vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB46 (requalified) — antitoxin VapB46 vapB46 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapC14 (requalified) — ribonuclease VapC14 vapC14 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c vapB8 (requalified) — antitoxin VapB8 vapB8 Rv0666 (dark) — hypothetical protein Rv0666 atsD (requalified) — arylsulfatase AtsD atsD vapB47 (requalified) — antitoxin VapB47 vapB47 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv0597c (family_assigned) — ATP-binding protein Rv0597c Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 Rv1947 (family_assigned) — hypothetical protein Rv1947 Rv0470A (family_assigned) — hypothetical protein Rv0470A Rv1639c (family_assigned) — alpha/beta hydrolase family protein Rv1639c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c vapB35 (requalified) — antitoxin VapB35 vapB35 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3386 (requalified) — transposase Rv3386 vapB48 (requalified) — antitoxin VapB48 vapB48 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 glpK (requalified) — glycerol kinase GlpK glpK Rv3698 (family_assigned) — hypothetical protein Rv3698 vapB14 (requalified) — antitoxin vapB14 Rv1949c (dark) — Conserved hypothetical protein Rv1949c Rv1950c (dark) — hypothetical protein Rv1950c Rv1951c (dark) — hypothetical protein Rv1951c vapB37 (requalified) — antitoxin vapB37 vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.