MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0624 · 46 genes shown · anchor vapB30 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapC36 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC36 vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34 Rv0622 (dark) — DUF732 domain-containing protein Rv0622 lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv1742 (family_assigned) — hypothetical protein Rv1742 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c parE1 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE1 cobB (requalified) — NAD-dependent protein deacylase cobB Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 Rv1393c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1393c Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 virS (family_assigned) — AraC family transcriptional regulator virS Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv1931c (family_assigned) — transcriptional regulator Rv1931c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv1556 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1556 embR (requalified) — response regulator transcription factor EmbR embR Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.