MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0616A · 46 genes shown · anchor vapC29 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB29 (requalified) — antitoxin VapB29 vapB29 vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 Rv0616c (dark) — Hypothetical protein Rv0616c galTb (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTb galTa (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTa galK (requalified) — galactokinase galK vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 vapC23 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC23 Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC13 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC13 vapC7 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC7 vapB1 (requalified) — antitoxin VapB1 vapB1 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 galE1 (requalified) — UDP-glucose 4-epimerase galE1 galE2 (family_assigned) — SDR family oxidoreductase galE2 glf (requalified) — UDP-galactopyranose mutase glf Rv3468c (requalified) — dTDP-glucose 4,6-dehydratase Rv3468c Rv1752 (family_assigned) — hypothetical protein Rv1752 Rv0648 (requalified) — alpha-mannosidase Rv0648 Rv0745 (family_assigned) — hypothetical protein Rv0745 bglS (requalified) — beta-glucosidase BglS bglS vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR vapB23 (requalified) — antitoxin VapB23 vapB23 Rv2862c (family_assigned) — DUF1707 domain-containing protein Rv2862c mapB (requalified) — methionine aminopeptidase mapB vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c Rv3098A (family_assigned) — PemK-like protein Rv3098A vapB47 (requalified) — antitoxin VapB47 vapB47 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 vapC8 (family_assigned) — PIN domain-containing protein vapC8 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 vapB46 (requalified) — antitoxin VapB46 vapB46 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapB13 (requalified) — antitoxin vapB13 PE_PGRS34 (family_assigned) — PE-PGRS family protein PE_PGRS34 PE_PGRS34

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.