MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0611c · 36 genes shown · anchor vapC24 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0611c (family_assigned) — DUF4926 domain-containing protein Rv0611c Rv0610c (family_assigned) — hypothetical protein Rv0610c Rv0612 (family_assigned) — hypothetical protein Rv0612 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 vapC10 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC10 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv3081 (requalified) — nucleotidyltransferase Rv3081 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 vapB24 (requalified) — antitoxin vapB24 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 vapB20 (requalified) — type II toxin-antitoxin system antitoxin VapB20 vapB20 vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 Rv2548A (dark) — hypothetical protein Rv2548A vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapB10 (family_assigned) — CopG family transcriptional regulator vapB10 nlhH (family_assigned) — alpha/beta hydrolase nlhH lipI (family_assigned) — alpha/beta hydrolase lipI PE_PGRS25 (family_assigned) — PE-PGRS family protein PE_PGRS25 PE_PGRS25 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 Rv2209 (requalified) — MFS transporter Rv2209 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 Rv1004c (family_assigned) — hypothetical protein Rv1004c espE (requalified) — type VII secretion system ESX-1 associated protein espE iniB (requalified) — isoniazid-induced protein IniB iniB PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE54 (family_assigned) — PPE family protein PPE54 PPE54

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.