MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0609 · 41 genes shown · anchor vapB30 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB28 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB28 Rv0609A (dark) — hypothetical protein Rv0609A vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 Rv0607 (dark) — hypothetical protein Rv0607 Rv0605 (family_assigned) — IS607-like element IS1536 family transposase Rv0605 vapB11 (requalified) — antitoxin VapB11 vapB11 Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 vapB36 (requalified) — antitoxin VapB36 vapB36 vapC15 (family_assigned) — PIN domain nuclease vapC15 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapC36 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC36 vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34 Rv0622 (dark) — DUF732 domain-containing protein Rv0622 lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv1742 (family_assigned) — hypothetical protein Rv1742 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv2885c (requalified) — transposase Rv2885c Rv3827c (requalified) — transposase Rv3827c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv2979c (family_assigned) — IS607 family transposase Rv2979c vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 cobB (requalified) — NAD-dependent protein deacylase cobB Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 Rv2803 (family_assigned) — hypothetical protein Rv2803 hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 PE_PGRS35 (family_assigned) — PE-PGRS family protein PE_PGRS35 PE_PGRS35 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 vapB15 (requalified) — antitoxin VapB15 vapB15 Rv2008c (family_assigned) — hypothetical protein Rv2008c vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.