MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0598c · 45 genes shown · anchor vapB27 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC27 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC27 vapB27 (requalified) — type II toxin-antitoxin system antitoxin VapB27 vapB27 Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c Rv0597c (family_assigned) — ATP-binding protein Rv0597c vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c vapC2 (family_assigned) — PIN domain nuclease vapC2 vapC15 (family_assigned) — PIN domain nuclease vapC15 vapC44 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC44 vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA prrA (requalified) — two-component system response regulator PrrA prrA mtrA (requalified) — two-component system response regulator MtrA mtrA regX3 (requalified) — two component sensory transduction protein RegX regX3 mprA (requalified) — two-component system response regulator MprA mprA trcR (requalified) — two-component system response regulator TrcR trcR Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC14 (requalified) — ribonuclease VapC14 vapC14 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv3479 (requalified) — transmembrane protein Rv3479 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB28 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB28 Rv0609A (dark) — hypothetical protein Rv0609A vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 Rv0607 (dark) — hypothetical protein Rv0607 Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.