MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0582 · 44 genes shown · anchor vapB26 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 Rv0580c (requalified) — mycobacterial cell wall protein Rv0580c Rv0580c Rv3387 (requalified) — transposase Rv3387 Rv2961 (requalified) — transposase Rv2961 vapC18 (family_assigned) — PIN domain nuclease vapC18 vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC21 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC21 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 Rv2735c (requalified) — three-Cys-motif partner protein TcmP Rv2735c Rv3386 (requalified) — transposase Rv3386 vapB10 (family_assigned) — CopG family transcriptional regulator vapB10 Rv0579 (family_assigned) — Mut7-C RNAse domain-containing protein Rv0579 mog (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis mog mazF4 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF4 Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c vapB46 (requalified) — antitoxin VapB46 vapB46 Rv2086 (family_assigned) — hypothetical protein Rv2086 Rv2960c (dark) — hypothetical protein Rv2960c vapB18 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB18 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 lppB (family_assigned) — LppA family lipoprotein lppB lppA (family_assigned) — LppA family lipoprotein lppA vapB20 (requalified) — type II toxin-antitoxin system antitoxin VapB20 vapB20 Rv2548A (dark) — hypothetical protein Rv2548A vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv0611c (family_assigned) — DUF4926 domain-containing protein Rv0611c vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 mazE9 (requalified) — antitoxin MazE9 mazE9 Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c vapB21 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB21 hsdM (requalified) — class I SAM-dependent DNA methyltransferase hsdM vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c Rv2019 (family_assigned) — hypothetical protein Rv2019 Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c vapC16 (requalified) — ribonuclease VapC16 vapC16

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.