MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0578c · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS7 (family_assigned) — PE-PGRS family protein PE_PGRS7 PE_PGRS7 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv3213c (family_assigned) — AAA family ATPase Rv3213c Rv2813 (family_assigned) — ExeA family protein Rv2813 Rv3212 (family_assigned) — hypothetical protein Rv3212 aglA (family_assigned) — glycoside hydrolase family 13 protein aglA Rv0197 (requalified) — oxidoreductase Rv0197 cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB entC (requalified) — isochorismate synthase entC gpm2 (requalified) — phosphoglycerate mutase gpm2 Rv2647 (requalified) — hypothetical protein Rv2647 ftsK (requalified) — DNA translocase FtsK ftsK dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA Rv2812 (family_assigned) — helix-turn-helix domain-containing protein Rv2812 Rv3638 (family_assigned) — ATP-binding protein Rv3638 Rv2811 (family_assigned) — hypothetical protein Rv2811 gltB (family_assigned) — glutamate synthase large subunit gltB rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3205c (family_assigned) — hypothetical protein Rv3205c lppL (family_assigned) — hypothetical protein lppL Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 mak (requalified) — maltokinase mak glbO (requalified) — group 2 truncated hemoglobin GlbO glbO treS (requalified) — maltose alpha-D-glucosyltransferase treS malQ (requalified) — 4-alpha-glucanotransferase malQ bglS (requalified) — beta-glucosidase BglS bglS Rv2469c (requalified) — HNH endonuclease Rv2469c Rv0196 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0196 qcrC (requalified) — cytochrome c qcrC tuf (requalified) — elongation factor Tu tuf fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 Rv0295c (family_assigned) — Stf0 family sulfotransferase Rv0295c cas1 (requalified) — CRISPR-associated endonuclease Cas1 cas1 cas10 (requalified) — type III-A CRISPR-associated protein Cas10/Csm1 cas10 csm3 (requalified) — type III-A CRISPR-associated RAMP protein Csm3 csm3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.