MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0560c · 46 genes shown · anchor menJ · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0560c (requalified) — benzoquinone methyltransferase Rv0560c Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c menJ (requalified) — menaquinone reductase menJ Rv0559c (family_assigned) — DUF732 domain-containing protein Rv0559c grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 rplL (requalified) — 50S ribosomal protein L7/L12 rplL moxR2 (family_assigned) — MoxR family ATPase moxR2 ephB (requalified) — epoxide hydrolase EphB ephB moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv2887 (family_assigned) — MarR family transcriptional regulator Rv2887 entC (requalified) — isochorismate synthase entC mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 Rv3161c (family_assigned) — aromatic ring-hydroxylating dioxygenase subunit al Rv3161c Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA htpX (requalified) — zinc metalloprotease HtpX htpX fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB Rv0455c (family_assigned) — DUF5078 domain-containing protein Rv0455c Rv2536 (family_assigned) — B-4DMT family transporter Rv2536 secE2 (family_assigned) — protein translocase subunit SecE secE2 idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsB (family_assigned) — polyprenyl synthetase family protein idsB idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 phyA (requalified) — presqualene diphosphate synthase HpnD phyA eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 rplJ (requalified) — 50S ribosomal protein L10 rplJ rplM (requalified) — 50S ribosomal protein L13 rplM rpsI (requalified) — 30S ribosomal protein S9 rpsI rplK (requalified) — 50S ribosomal protein L11 rplK rplP (requalified) — 50S ribosomal protein L16 rplP rpmA (requalified) — 50S ribosomal protein L27 rpmA Rv3693 (family_assigned) — DUF58 domain-containing protein Rv3693 Rv3691 (family_assigned) — hypothetical protein Rv3691 Rv1453 (family_assigned) — PucR family transcriptional regulator Rv1453

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.