MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0557 · 46 genes shown · anchor menH · open gene page → · ← back to 1 hop

Evidence: Min score 0
mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA menH (requalified) — demethylmenaquinone methyltransferase menH menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ menC (requalified) — o-succinylbenzoate synthase menC Rv0552 (requalified) — amidohydrolase Rv0552 bpoC (family_assigned) — alpha/beta hydrolase bpoC Rv2529 (family_assigned) — hypothetical protein Rv2529 udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA Rv1510 (family_assigned) — hypothetical protein Rv1510 Rv2307c (family_assigned) — alpha/beta hydrolase Rv2307c menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA entC (requalified) — isochorismate synthase entC menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE glgP (family_assigned) — glycosyltransferase family 1 protein glgP malQ (requalified) — 4-alpha-glucanotransferase malQ treX (requalified) — maltooligosyl trehalose synthase treX Rv3032 (requalified) — glycogen synthase Rv3032 mak (requalified) — maltokinase mak treY (requalified) — maltooligosyl trehalose synthase treY otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 otsB2 (requalified) — trehalose-phosphatase otsB2 treS (requalified) — maltose alpha-D-glucosyltransferase treS Rv2402 (requalified) — trehalase Rv2402 menE (requalified) — o-succinylbenzoate--CoA ligase menE fadD8 (requalified) — fatty-acid--CoA ligase FadD8 fadD8 hpx (requalified) — non-heme haloperoxidase Hpx hpx topA (requalified) — type I DNA topoisomerase topA polA (requalified) — DNA polymerase I polA lprE (family_assigned) — LppP/LprE family lipoprotein lprE Rv2090 (requalified) — 5'-3' exonuclease Rv2090 rplA (requalified) — 50S ribosomal protein L1 rplA recA (requalified) — intein-containing recombinase RecA recA galE1 (requalified) — UDP-glucose 4-epimerase galE1 galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU Rv3468c (requalified) — dTDP-glucose 4,6-dehydratase Rv3468c galE2 (family_assigned) — SDR family oxidoreductase galE2 rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA glf (requalified) — UDP-galactopyranose mutase glf rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.