MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0555 · 45 genes shown · anchor menC · open gene page → · ← back to 1 hop

Evidence: Min score 0
menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD entC (requalified) — isochorismate synthase entC menC (requalified) — o-succinylbenzoate synthase menC Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB bpoC (family_assigned) — alpha/beta hydrolase bpoC mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA Rv0552 (requalified) — amidohydrolase Rv0552 menE (requalified) — o-succinylbenzoate--CoA ligase menE menH (requalified) — demethylmenaquinone methyltransferase menH Rv3909 (dark) — hypothetical protein Rv3909 Rv1931c (family_assigned) — transcriptional regulator Rv1931c mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtI (requalified) — salicylate synthase mbtI mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA aroF (requalified) — chorismate synthase aroF Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c fadD8 (requalified) — fatty-acid--CoA ligase FadD8 fadD8 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv1847 (family_assigned) — PaaI family thioesterase Rv1847 Rv0544c (family_assigned) — hypothetical protein Rv0544c hpx (requalified) — non-heme haloperoxidase Hpx hpx glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv0535 (requalified) — 5'-methylthioadenosine phosphorylase Rv0535 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 Rv0541c (family_assigned) — integral membrane protein Rv0541c Rv0543c (family_assigned) — DUF3349 domain-containing protein Rv0543c pitA (requalified) — anion permease pitA engA (requalified) — ribosome biogenesis GTPase Der engA murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3906c (requalified) — pullulanase Rv3906c Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv1930c (requalified) — glutamine amidotransferase Rv1930c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c sigI (requalified) — RNA polymerase sigma factor SigI sigI virS (family_assigned) — AraC family transcriptional regulator virS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.