MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0549c · 45 genes shown · anchor vapB3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 vapB3 (family_assigned) — type II toxin-antitoxin system CcdA family antitox vapB3 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapB47 (requalified) — antitoxin VapB47 vapB47 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 fadD8 (requalified) — fatty-acid--CoA ligase FadD8 fadD8 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 mazE9 (requalified) — antitoxin MazE9 mazE9 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB vapC32 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC32 Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 Rv3188 (family_assigned) — antitoxin Xre/MbcA/ParS toxin-binding domain-conta Rv3188 vapB9 (requalified) — antitoxin VapB9 vapB9 Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 Rv0958 (family_assigned) — ATP-binding protein Rv0958 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c vapB46 (requalified) — antitoxin VapB46 vapB46 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapB35 (requalified) — antitoxin VapB35 vapB35 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R menC (requalified) — o-succinylbenzoate synthase menC Rv0552 (requalified) — amidohydrolase Rv0552 rplF (requalified) — 50S ribosomal protein L6 rplF pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mazF9 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF9 mazF1 (requalified) — toxin MazF1 mazF1 mazF7 (requalified) — mRNA interferase MazF7 mazF7 mazF6 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF6 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 parE1 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE1 Rv2019 (family_assigned) — hypothetical protein Rv2019 Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC16 (requalified) — ribonuclease VapC16 vapC16 vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.