MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0544c · 46 genes shown · anchor pitA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0544c (family_assigned) — hypothetical protein Rv0544c pitA (requalified) — anion permease pitA Rv0543c (family_assigned) — DUF3349 domain-containing protein Rv0543c trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC Rv0541c (family_assigned) — integral membrane protein Rv0541c Rv0547c (family_assigned) — SDR family oxidoreductase Rv0547c menE (requalified) — o-succinylbenzoate--CoA ligase menE menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB Rv0546c (family_assigned) — VOC family protein Rv0546c Rv1887 (family_assigned) — hypothetical protein Rv1887 Rv1924c (family_assigned) — hypothetical protein Rv1924c Rv1728c (requalified) — glycoside hydrolase Rv1728c Rv1526c (requalified) — glycosyltransferase Rv1526c Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 trpA (family_assigned) — tryptophan synthase subunit alpha trpA trpB (family_assigned) — tryptophan synthase subunit beta trpB trpE (requalified) — anthranilate synthase component I trpE trpG (requalified) — anthranilate synthase component II trpG trpD (requalified) — anthranilate phosphoribosyltransferase trpD mbtI (requalified) — salicylate synthase mbtI Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 engA (requalified) — ribosome biogenesis GTPase Der engA Rv0218 (requalified) — molybdopterin-dependent oxidoreductase Rv0218 Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c tgs2 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs2 menC (requalified) — o-succinylbenzoate synthase menC Rv1847 (family_assigned) — PaaI family thioesterase Rv1847 menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA Rv1473A (family_assigned) — transcriptional regulator Rv1473A rplB (requalified) — 50S ribosomal protein L2 rplB rplD (requalified) — 50S ribosomal protein L4 rplD zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 rpsA (requalified) — 30S ribosomal protein S1 rpsA fadD31 (requalified) — fatty-acid--AMP ligase FAAL31/FadD31 fadD31 nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF Rv1626 (family_assigned) — ANTAR domain-containing response regulator Rv1626 Rv1875 (requalified) — PPOX class F420-dependent oxidoreductase Rv1875 Rv1729c (requalified) — class I SAM-dependent methyltransferase Rv1729c Rv3658c (family_assigned) — type II secretion system F family protein Rv3658c ptrp (family_assigned) — hypothetical protein ptrp Rv2862c (family_assigned) — DUF1707 domain-containing protein Rv2862c Rv1730c (family_assigned) — serine hydrolase domain-containing protein Rv1730c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.