MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0534c · 46 genes shown · anchor menB · open gene page → · ← back to 1 hop

Evidence: Min score 0
menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA Rv1847 (family_assigned) — PaaI family thioesterase Rv1847 menH (requalified) — demethylmenaquinone methyltransferase menH menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD Rv0535 (requalified) — 5'-methylthioadenosine phosphorylase Rv0535 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 fabH (requalified) — beta-ketoacyl-ACP synthase III fabH menC (requalified) — o-succinylbenzoate synthase menC menE (requalified) — o-succinylbenzoate--CoA ligase menE entC (requalified) — isochorismate synthase entC hisH (family_assigned) — imidazole glycerol phosphate synthase subunit HisH hisH menJ (requalified) — menaquinone reductase menJ ureA (family_assigned) — urease subunit gamma ureA ureC (family_assigned) — urease subunit alpha ureC ureF (requalified) — urease accessory protein UreF ureF ureB (family_assigned) — urease subunit beta ureB mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 bpoC (family_assigned) — alpha/beta hydrolase bpoC Rv0544c (family_assigned) — hypothetical protein Rv0544c mtn (requalified) — 5'-methylthioadenosine/adenosylhomocysteine nucleo mtn speE (requalified) — spermidine synthase speE apt (requalified) — adenine phosphoribosyltransferase apt rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB fas (requalified) — fatty acid synthase fas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD kasA (requalified) — 3-oxoacyl-ACP synthase KasA kasA kasB (requalified) — 3-oxoacyl-ACP synthase 2 kasB inhA (requalified) — NADH-dependent enoyl-ACP reductase InhA inhA Rv0552 (requalified) — amidohydrolase Rv0552 fadD8 (requalified) — fatty-acid--CoA ligase FadD8 fadD8 Rv0541c (family_assigned) — integral membrane protein Rv0541c Rv0543c (family_assigned) — DUF3349 domain-containing protein Rv0543c pitA (requalified) — anion permease pitA engA (requalified) — ribosome biogenesis GTPase Der engA mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtI (requalified) — salicylate synthase mbtI mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA aroF (requalified) — chorismate synthase aroF Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.