MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0494 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS virS (family_assigned) — AraC family transcriptional regulator virS Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv0493c (family_assigned) — hypothetical protein Rv0493c cobB (requalified) — NAD-dependent protein deacylase cobB nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 embR (requalified) — response regulator transcription factor EmbR embR cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1930c (requalified) — glutamine amidotransferase Rv1930c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c Rv0791c (requalified) — LLM class flavin-dependent oxidoreductase Rv0791c Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c Rv0603 (family_assigned) — hypothetical protein Rv0603 trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS prrB (requalified) — two-component system sensor histidine kinase PrrB prrB kdpE (requalified) — two-component system response regulator KdpE kdpE Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv0492c (family_assigned) — GMC family oxidoreductase Rv0492c Rv0492A (family_assigned) — hypothetical protein Rv0492A Rv1648 (family_assigned) — rhomboid-like protein Rv1648 Rv1775 (family_assigned) — hypothetical protein Rv1775 lprA (requalified) — TLR2 agonist LprA lprA nadE (requalified) — NAD(+) synthase nadE Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.