MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0493c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0493c (family_assigned) — hypothetical protein Rv0493c Rv0492c (family_assigned) — GMC family oxidoreductase Rv0492c Rv0492A (family_assigned) — hypothetical protein Rv0492A Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv1648 (family_assigned) — rhomboid-like protein Rv1648 Rv1775 (family_assigned) — hypothetical protein Rv1775 lprA (requalified) — TLR2 agonist LprA lprA rsdA (requalified) — anti-sigma D factor RsdA rsdA ptrp (family_assigned) — hypothetical protein ptrp Rv3788 (family_assigned) — GreA/GreB family elongation factor Rv3788 Rv2113 (family_assigned) — integral membrane protein Rv2113 mce3A (family_assigned) — Mce family protein Mce3A mce3A cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv1691 (family_assigned) — hypothetical protein Rv1691 qcrC (requalified) — cytochrome c qcrC Rv1973 (family_assigned) — hypothetical protein Rv1973 Rv1972 (requalified) — Mce associated membrane protein Rv1972 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv1647 (requalified) — adenylate cyclase Rv1647 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv3909 (dark) — hypothetical protein Rv3909 Rv1774 (requalified) — FAD-binding oxidoreductase Rv1774 Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv1269c (family_assigned) — DUF4189 domain-containing protein Rv1269c papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv2365c (requalified) — cytidine deaminase Rv2365c sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 Rv2164c (family_assigned) — hypothetical protein Rv2164c rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv3789 (requalified) — arabinogalactan biosynthesis protein Rv3789 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.