MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0492c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0492c (family_assigned) — GMC family oxidoreductase Rv0492c Rv0493c (family_assigned) — hypothetical protein Rv0493c Rv0492A (family_assigned) — hypothetical protein Rv0492A Rv1691 (family_assigned) — hypothetical protein Rv1691 qcrC (requalified) — cytochrome c qcrC Rv1973 (family_assigned) — hypothetical protein Rv1973 Rv1972 (requalified) — Mce associated membrane protein Rv1972 Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c Rv2267c (requalified) — sulfotransferase Rv2267c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 PE23 (family_assigned) — PE family protein PE23 PE23 PE_PGRS62 (family_assigned) — PE-PGRS family protein PE_PGRS62 PE_PGRS62 TB22.2 (family_assigned) — RsiV family protein TB22.2 Rv1648 (family_assigned) — rhomboid-like protein Rv1648 Rv1775 (family_assigned) — hypothetical protein Rv1775 lprA (requalified) — TLR2 agonist LprA lprA Rv1692 (family_assigned) — HAD-IIA family hydrolase Rv1692 htpG (requalified) — molecular chaperone HtpG htpG alaS (requalified) — alanine--tRNA ligase alaS ppnK (requalified) — NAD kinase ppnK tlyA (requalified) — 16S/23S rRNA (cytidine-2'-O)-methyltransferase Tly tlyA Rv1693 (dark) — hypothetical protein Rv1693 ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaE (family_assigned) — heme-copper oxidase subunit III ctaE mce3A (family_assigned) — Mce family protein Mce3A mce3A lprM (family_assigned) — Mce family lipoprotein LprM lprM mce3F (family_assigned) — MlaD family protein mce3F mce3C (family_assigned) — virulence factor Mce family protein mce3C Rv1975 (family_assigned) — CAP domain-containing protein Rv1975 mce3D (family_assigned) — virulence factor Mce family protein mce3D Rv3530c (family_assigned) — SDR family oxidoreductase Rv3530c Rv3531c (family_assigned) — hypothetical protein Rv3531c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA mftF (requalified) — mycofactocin biosynthesis glycosyltransferase MftF mftF cyp128 (requalified) — cytochrome P450 cyp128 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.