MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0491 · 41 genes shown · anchor senX3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
regX3 (requalified) — two component sensory transduction protein RegX regX3 senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS tcrY (requalified) — two component sensor kinase TcrY tcrY prrB (requalified) — two-component system sensor histidine kinase PrrB prrB mprB (requalified) — two-component system sensor histidine kinase MprB mprB phoR (requalified) — sensory box histidine kinase PhoR phoR mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 mtrA (requalified) — two-component system response regulator MtrA mtrA prrA (requalified) — two-component system response regulator PrrA prrA mprA (requalified) — two-component system response regulator MprA mprA trcR (requalified) — two-component system response regulator TrcR trcR phoP (requalified) — two-component system response regulator PhoP phoP tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA kdpE (requalified) — two-component system response regulator KdpE kdpE tcrX (requalified) — two-component system response regulator TcrX tcrX pepD (requalified) — serine protease PepD pepD lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv0485 (family_assigned) — transcriptional regulator Rv0485 pgk (requalified) — phosphoglycerate kinase pgk eno (requalified) — phosphopyruvate hydratase eno serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 fba (requalified) — class II fructose-bisphosphate aldolase fba pgi (requalified) — glucose-6-phosphate isomerase pgi serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB Rv3679 (family_assigned) — ArsA family ATPase Rv3679 fadE5 (requalified) — acyl-CoA dehydrogenase fadE5 Rv3662c (requalified) — oxidoreductase Rv3662c fadE15 (requalified) — acyl-CoA dehydrogenase fadE15 TB16.3 (family_assigned) — SRPBCC family protein TB16.3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.