MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0490 · 38 genes shown · anchor regX3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 regX3 (requalified) — two component sensory transduction protein RegX regX3 mtrA (requalified) — two-component system response regulator MtrA mtrA prrA (requalified) — two-component system response regulator PrrA prrA mprA (requalified) — two-component system response regulator MprA mprA trcR (requalified) — two-component system response regulator TrcR trcR phoP (requalified) — two-component system response regulator PhoP phoP tcrX (requalified) — two-component system response regulator TcrX tcrX tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA kdpE (requalified) — two-component system response regulator KdpE kdpE Rv2884 (family_assigned) — transcriptional regulator Rv2884 Rv1332 (family_assigned) — transcriptional regulator Rv1332 gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS tcrY (requalified) — two component sensor kinase TcrY tcrY prrB (requalified) — two-component system sensor histidine kinase PrrB prrB mprB (requalified) — two-component system sensor histidine kinase MprB mprB mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB phoR (requalified) — sensory box histidine kinase PhoR phoR Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c Rv0603 (family_assigned) — hypothetical protein Rv0603 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr kdpD (requalified) — sensor histidine kinase KdpD kdpD Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA mec (requalified) — CysO-cysteine peptidase mec clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS Rv1333 (family_assigned) — P1 family peptidase Rv1333 Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 cysM (requalified) — O-phosphoserine sulfhydrylase cysM cysO (requalified) — sulfur carrier protein CysO cysO pgk (requalified) — phosphoglycerate kinase pgk eno (requalified) — phosphopyruvate hydratase eno serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 fba (requalified) — class II fructose-bisphosphate aldolase fba pgi (requalified) — glucose-6-phosphate isomerase pgi serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.