MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0487 · 46 genes shown · anchor mshA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA Rv3679 (family_assigned) — ArsA family ATPase Rv3679 fadE5 (requalified) — acyl-CoA dehydrogenase fadE5 Rv3662c (requalified) — oxidoreductase Rv3662c fadE15 (requalified) — acyl-CoA dehydrogenase fadE15 TB16.3 (family_assigned) — SRPBCC family protein TB16.3 Rv3680 (family_assigned) — ArsA family ATPase Rv3680 Rv0857 (family_assigned) — hypothetical protein Rv0857 Rv0485 (family_assigned) — transcriptional regulator Rv0485 Rv0854 (family_assigned) — SRPBCC family protein Rv0854 Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv3678A (family_assigned) — hypothetical protein Rv3678A Rv3678c (family_assigned) — RidA family protein Rv3678c Rv3677c (requalified) — MBL fold metallo-hydrolase Rv3677c fadB (requalified) — fatty oxidation protein FadB fadB fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA dppD (family_assigned) — ABC transporter ATP-binding protein dppD dppC (family_assigned) — dipeptide ABC transporter permease DppC dppC dppB (family_assigned) — ABC transporter permease dppB dppA (family_assigned) — ABC transporter substrate-binding protein dppA adnA (requalified) — ATP-dependent DNA helicase AdnA adnA echA12 (requalified) — enoyl-CoA hydratase echA12 Rv2184c (family_assigned) — hypothetical protein Rv2184c Rv2183c (dark) — hypothetical protein Rv2183c Rv3197 (family_assigned) — AarF/ABC1/UbiB kinase family protein Rv3197 Rv0502 (family_assigned) — lysophospholipid acyltransferase family protein Rv0502 Rv0856 (family_assigned) — hypothetical protein Rv0856 far (requalified) — fatty-acid-CoA racemase far Rv0484c (family_assigned) — SDR family oxidoreductase Rv0484c senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 regX3 (requalified) — two component sensory transduction protein RegX regX3 hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA Rv0476 (requalified) — transmembrane protein Rv0476 pgk (requalified) — phosphoglycerate kinase pgk eno (requalified) — phosphopyruvate hydratase eno serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 fba (requalified) — class II fructose-bisphosphate aldolase fba pgi (requalified) — glucose-6-phosphate isomerase pgi serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.