MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0477 · 45 genes shown · anchor deoC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0477 (dark) — DUF2599 domain-containing protein Rv0477 deoC (requalified) — deoxyribose-phosphate aldolase deoC Rv0476 (requalified) — transmembrane protein Rv0476 hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 cut5b (family_assigned) — Probable cutinase [second part] Cut5b cut5b eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 cut1 (requalified) — cutinase cut1 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv3035 (family_assigned) — hypothetical protein Rv3035 Rv2923c (family_assigned) — OsmC family protein Rv2923c mmpL7 (requalified) — phthiocerol dimycocerosate RND transporter MmpL7 mmpL7 ahpD (requalified) — alkyl hydroperoxide reductase ahpD rbsK (requalified) — ribokinase RbsK rbsK deoA (requalified) — thymidine phosphorylase deoA tkt (requalified) — transketolase tkt tal (requalified) — transaldolase tal fba (requalified) — class II fructose-bisphosphate aldolase fba Rv0473 (dark) — DUF445 domain-containing protein Rv0473 Rv0472c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0472c ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c TB16.3 (family_assigned) — SRPBCC family protein TB16.3 Rv0854 (family_assigned) — SRPBCC family protein Rv0854 Rv0857 (family_assigned) — hypothetical protein Rv0857 Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 cut5a (family_assigned) — Probable cutinase precursor [first part] Cut5a cut5a Rv0185 (family_assigned) — TIGR04338 family metallohydrolase Rv0185 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB Rv3725 (requalified) — oxidoreductase Rv3725 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM Rv1726 (requalified) — FAD-binding oxidoreductase Rv1726 Rv0434 (family_assigned) — LON peptidase substrate-binding domain-containing Rv0434 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.