MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0476 · 46 genes shown · anchor deoC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0476 (requalified) — transmembrane protein Rv0476 deoC (requalified) — deoxyribose-phosphate aldolase deoC Rv0477 (dark) — DUF2599 domain-containing protein Rv0477 hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 Rv0473 (dark) — DUF445 domain-containing protein Rv0473 Rv0472c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0472c cei (requalified) — envelope integrity protein Cei cei Rv3050c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3050c Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2772c (family_assigned) — hypothetical protein Rv2772c Rv1382 (requalified) — transporter Rv1382 rbsK (requalified) — ribokinase RbsK rbsK deoA (requalified) — thymidine phosphorylase deoA tkt (requalified) — transketolase tkt tal (requalified) — transaldolase tal fba (requalified) — class II fructose-bisphosphate aldolase fba cut5b (family_assigned) — Probable cutinase [second part] Cut5b cut5b eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c TB16.3 (family_assigned) — SRPBCC family protein TB16.3 Rv0854 (family_assigned) — SRPBCC family protein Rv0854 Rv0857 (family_assigned) — hypothetical protein Rv0857 Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 Rv0471c (requalified) — 1%2C4-dihydroxy-2-naphthoate prenyltransferase Rv0471c Rv0470A (family_assigned) — hypothetical protein Rv0470A Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE Rv3049c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3049c nrdH (requalified) — redoxin NrdH nrdH nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 Rv0250c (family_assigned) — hypothetical protein Rv0250c Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c recO (requalified) — DNA repair protein RecO recO amiA2 (requalified) — amidase amiA2 Rv0497 (family_assigned) — hypothetical protein Rv0497 menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD bpoC (family_assigned) — alpha/beta hydrolase bpoC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.