MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0469 · 46 genes shown · anchor fadB2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
umaA (requalified) — mycolic acid synthase UmaA umaA fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 icl1 (requalified) — isocitrate lyase icl1 ufaA1 (requalified) — class I SAM-dependent methyltransferase ufaA1 Rv1752 (family_assigned) — hypothetical protein Rv1752 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv0386 (family_assigned) — LuxR family transcriptional regulator Rv0386 Rv0472c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0472c desA1 (requalified) — acyl-ACP desaturase DesA desA1 Rv0373c (family_assigned) — aerobic carbon-monoxide dehydrogenase large subuni Rv0373c Rv0195 (requalified) — response regulator transcription factor Rv0195 Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 Rv0725c (family_assigned) — hypothetical protein Rv0725c fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 echA8 (requalified) — enoyl-CoA hydratase echA8 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 glcB (requalified) — malate synthase G glcB aceAb (requalified) — isocitrate lyase AceAb aceAb aceAa (requalified) — isocitrate lyase AceAa aceAa acn (requalified) — iron-regulated aconitate hydratase Acn acn ackA (requalified) — acetate kinase ackA Rv0449c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0449c Rv0448c (dark) — hypothetical protein Rv0448c Rv0446c (family_assigned) — DUF1295 domain-containing protein Rv0446c Rv3840 (family_assigned) — transcriptional regulator Rv3840 sigK (family_assigned) — sigma-70 family RNA polymerase sigma factor SigK sigK Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv0498 (requalified) — sugar phosphate isomerase/epimerase Rv0498 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c galK (requalified) — galactokinase galK Rv1751 (requalified) — oxidoreductase Rv1751 Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2843 (family_assigned) — hypothetical protein Rv2843 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr embR (requalified) — response regulator transcription factor EmbR embR kdpE (requalified) — two-component system response regulator KdpE kdpE Rv1931c (family_assigned) — transcriptional regulator Rv1931c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv2434c (requalified) — mechanosensitive ion channel Rv2434c Rv0104 (family_assigned) — cyclic nucleotide-binding domain-containing protei Rv0104 glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.