MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0465c · 46 genes shown · anchor icl1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
ramB (family_assigned) — acetate metabolism transcriptional regulator RamB ramB Rv0464c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv0464c icl1 (requalified) — isocitrate lyase icl1 Rv0466 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv0466 prpD (requalified) — 2-methylcitrate dehydratase prpD Rv0332 (family_assigned) — hypothetical protein Rv0332 Rv0366c (family_assigned) — zeta toxin family protein Rv0366c Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 aceAa (requalified) — isocitrate lyase AceAa aceAa glcB (requalified) — malate synthase G glcB cmtR (family_assigned) — Cd(II)/Pb(II)-sensing metalloregulatory transcript cmtR Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv3173c (family_assigned) — helix-turn-helix domain-containing protein Rv3173c Rv1683 (requalified) — acyl-CoA synthetase Rv1683 Rv3249c (family_assigned) — TetR family transcriptional regulator Rv3249c Rv0885 (requalified) — diiron oxygenase Rv0885 Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 aceAb (requalified) — isocitrate lyase AceAb aceAb acn (requalified) — iron-regulated aconitate hydratase Acn acn ackA (requalified) — acetate kinase ackA lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3035 (family_assigned) — hypothetical protein Rv3035 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 prpC (requalified) — 2-methylcitrate synthase prpC Rv1129c (family_assigned) — short-chain fatty acyl-CoA regulator family protei Rv1129c Rv1132 (family_assigned) — DUF3556 domain-containing protein Rv1132 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c gltA2 (requalified) — citrate synthase gltA2 Rv2515c (family_assigned) — XRE family transcriptional regulator Rv2515c Rv0333 (family_assigned) — nuclear transport factor 2 family protein Rv0333 rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA plsC (family_assigned) — HAD-IB family hydrolase plsC Rv0367c (family_assigned) — hypothetical protein Rv0367c Rv0365c (family_assigned) — glycoside hydrolase family 76 protein Rv0365c Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0369c (requalified) — membrane oxidoreductase Rv0369c Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.