MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0464c · 46 genes shown · anchor ramB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0464c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv0464c ramB (family_assigned) — acetate metabolism transcriptional regulator RamB ramB Rv1683 (requalified) — acyl-CoA synthetase Rv1683 Rv0466 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv0466 Rv3249c (family_assigned) — TetR family transcriptional regulator Rv3249c Rv0885 (requalified) — diiron oxygenase Rv0885 Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c mmpA (requalified) — hypothetical protein mmpA Rv1476 (family_assigned) — DUF6676 family protein Rv1476 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv1590 (family_assigned) — hypothetical protein Rv1590 Rv2001 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv2001 cysC (requalified) — adenylyl-sulfate kinase cysC icl1 (requalified) — isocitrate lyase icl1 prpD (requalified) — 2-methylcitrate dehydratase prpD Rv0332 (family_assigned) — hypothetical protein Rv0332 Rv0366c (family_assigned) — zeta toxin family protein Rv0366c Rv1684 (family_assigned) — Trm112 family protein Rv1684 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3035 (family_assigned) — hypothetical protein Rv3035 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 alkB (requalified) — alkane 1-monooxygenase alkB rubB (requalified) — rubredoxin RubB rubB rubA (requalified) — rubredoxin rubA sahH (requalified) — adenosylhomocysteinase sahH tmk (requalified) — dTMP kinase tmk fprB (requalified) — FAD-dependent oxidoreductase fprB serC (requalified) — phosphoserine transaminase serC Rv3338 (family_assigned) — Conserved hypothetical protein Rv3338 sepH (requalified) — septation protein SepH sepH Rv3802c (requalified) — phospholipase Rv3802c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB Rv0227c (family_assigned) — membrane protein Rv0227c aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv0228 (requalified) — acyltransferase Rv0228 Rv0224c (requalified) — class I SAM-dependent methyltransferase Rv0224c Rv3635 (family_assigned) — hypothetical protein Rv3635 Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.